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racA [2019-09-04 09:57:19]
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racA [2019-09-04 09:57:19]

cell division protein
locus
BSU_37030
pI
9.51
mw
20.93 kDa
protein length
184 aa Sequence Blast
gene length
555 bp Sequence Blast
product
cell division protein
essential
no
synonyms
ywkC
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.8|Cell division] → [category|SW 1.1.8.2|Other genes]

    • Gene

    Coordinates
    3,798,789 3,799,343

    The protein

    Protein family

  • racA family (single member, according to UniProt)

    • Structure

  • [PDB|5I44] (RacA-DN complex) [Pubmed|27085804]
  • [PDB|5I41] (DNA-binding domain) [Pubmed|27085804]

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)

    • Expression and Regulation

    Operons

    genes
    [gene|81CCDC33856F2F8BC59BCC7FED34015340D21C48|ywkD]-[gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]
    description
    [Pubmed|22383849]
    view in new tab

    genes
    [gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]
    description
    [pubmed|22383849]

    sigma factors

  • [protein|DC3449D5F195E5C2E9E14FEC95396C8F1FDF73B4|SigH]: sigma factor, [Pubmed|12493822], in [regulon|DC3449D5F195E5C2E9E14FEC95396C8F1FDF73B4|SigH regulon]

    • regulatory mechanism

  • [protein|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A]: activation, [Pubmed|12493822,14651647,15687200], in [regulon|2C54FE2ADC82FF414D732018C90649D477A925AD|Spo0A regulon]

    • regulation

  • expressed under conditions that trigger [SW|sporulation ]([SW|Spo0A]) [Pubmed|12493822,14651647,15687200]
    • view in new tab

    Biological materials

    Mutant

  • MGNA-B655 (ywkC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1654 NBRP B. subtilis, Japan]
  • BKE37030 ([gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE37030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCATACCTCCTTT, downstream forward: _UP4_TAAAGCAAAAAGCTCCCTTA
  • BKK37030 ([gene|09E9194E82DF199527F414DB0EC15547A71AD25E|racA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK37030 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGATCCCATACCTCCTTT, downstream forward: _UP4_TAAAGCAAAAAGCTCCCTTA

    • References

  • 27085804,15780934,19478798,12493822,12950914,21630458,14651647,15687200,12493822,23264578